Density plot of estimated distributions of autoregressive HMMs
Source:R/HMM_plots.R
plot_fitted_dist.Rd
Plots the estimated distributions (only the state-dependent stationary values are considered) of a fitted autoregressive HMM along with a histogram of the data.
Usage
plot_fitted_dist(
data,
dist,
param,
N,
delta,
title = "none",
breaks = 30,
xlab = "x",
legend = TRUE,
xlim = "none"
)
Arguments
- data
Input data for histogram.
- dist
string, indicates the kind of distribution, one of ['gamma', 'von Mises'].
- param
Vector of distribution parameters, in customary form, e.g. for 2 state gamma HMM: c(\(\mu1,\mu2,\sigma1,\sigma2\)).
- N
int, number of states (or weighted distributions) to be plotted.
- delta
Input vector for parameter delta.
- title
optional, title of the plot, if "none", then no title.
- breaks
optional, specify number of breaks of the histogram.
- xlab
optional, label of x-axis.
- legend
optional, plot legend (default: TRUE).
- xlim
optional, set a limit for x-axis for better visibility of the data.